BioNetFit [electronic resource] : a fitting tool compatible with BioNetGen, NFsim and distributed computing environments

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Tác giả:

Ngôn ngữ: eng

Ký hiệu phân loại: 571.3 Anatomy and morphology

Thông tin xuất bản: Washington, DC : Oak Ridge, Tenn. : United States. Department of Energy Work for Others Program ; Distributed by the Office of Scientific and Technical Information, U.S. Dept. of Energy, 2015

Mô tả vật lý: Size: p. 798-800 : , digital, PDF file.

Bộ sưu tập: Metadata

ID: 261067

Rule-based models are analyzed with specialized simulators, such as those provided by the BioNetGen and NFsim open-source software packages. Here in this paper, we present BioNetFit, a general-purpose fitting tool that is compatible with BioNetGen and NFsim. BioNetFit is designed to take advantage of distributed computing resources. This feature facilitates fitting (i.e. optimization of parameter values for consistency with data) when simulations are computationally expensive.
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