Automated Single Cell Data Decontamination Pipeline [electronic resource]

• Ngôn ngữ: eng
• Ký hiệu phân loại: 666.3 Pottery
• Thông tin xuất bản: Washington, D.C. : Oak Ridge, Tenn. : United States. Dept. of Energy. Office of Science ; Distributed by the Office of Scientific and Technical Information, U.S. Dept. of Energy, 2014
• Mô tả vật lý: Size: 2 p. : , digital, PDF file.
• Bộ sưu tập: Metadata
• ID: 264970
• Chủ đề: 1. 09 biomass fuels; 2. 99 general and miscellaneous; 3. Contaminated data; 4. Ncbi taxonomy; 5. Scddp

Tóm tắt

Recent technological advancements in single-cell genomics have encouraged the classification and functional assessment of microorganisms from a wide span of the biospheres phylogeny.1,2 Environmental processes of interest to the DOE, such as bioremediation and carbon cycling, can be elucidated through the genomic lens of these unculturable microbes. However, contamination can occur at various stages of the single-cell sequencing process. Contaminated data can lead to wasted time and effort on meaningless analyses, inaccurate or erroneous conclusions, and pollution of public databases. A fully automated decontamination tool is necessary to prevent these instances and increase the throughput of the single-cell sequencing process