Molecular Insights into α-Synuclein Fibrillation: A Raman Spectroscopy and Machine Learning Approach.

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Tác giả: Ojodomo J Achadu, Claudio Angione, Lucy Butler, Nathan P Coles, Suzan Elsheikh, Panagiota S Filippou, Meez Islam, Claire Jennings, Karunakaran Kalesh, Ahmad A Khundakar, David J Koss, Jon Marles-Wright, Annalisa Occhipinti, Tiago F Outeiro, Agathe Quesnel, Chaimaa Tarzi, Alan J Thomas

Ngôn ngữ: eng

Ký hiệu phân loại: 809.008 History and description with respect to kinds of persons

Thông tin xuất bản: United States : ACS chemical neuroscience , 2025

Mô tả vật lý:

Bộ sưu tập: NCBI

ID: 400350

The aggregation of α-synuclein is crucial to the development of Lewy body diseases, including Parkinson's disease and dementia with Lewy bodies. The aggregation pathway of α-synuclein typically involves a defined sequence of nucleation, elongation, and secondary nucleation, exhibiting prion-like spreading. This study employed Raman spectroscopy and machine learning analysis, alongside complementary techniques, to characterize the biomolecular changes during the fibrillation of purified recombinant wild-type α-synuclein protein. Monomeric α-synuclein was produced, purified, and subjected to a 7-day fibrillation assay to generate preformed fibrils. Stages of α-synuclein fibrillation were analyzed using Raman spectroscopy, with aggregation confirmed through negative staining transmission electron microscopy, mass spectrometry, and light scattering analyses. A machine learning pipeline incorporating principal component analysis and uniform manifold approximation and projection was used to analyze the Raman spectral data and identify significant peaks, resulting in differentiation between sample groups. Notable spectral shifts in α-synuclein were found in various stages of aggregation. Early changes (D1) included increases in α-helical structures (1303, 1330 cm
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