Applying bioinformatics to analyze auxinrelated genes in robusta coffee genome (Coffea canephora L.)

 0 Người đánh giá. Xếp hạng trung bình 0

Tác giả: Đình Sỹ Nguyễn

Ngôn ngữ: eng

Ký hiệu phân loại:

Thông tin xuất bản: Tạp chí Khoa học Tây Nguyên, 2024

Mô tả vật lý: tr.45667

Bộ sưu tập: Báo, Tạp chí

ID: 482081

 Coffea canephora, which belongs to the Rubiaceae family, is one of the most popular cultivated coffea worldwide. In this study, we identified and analyzed candidate genes that involved in auxinrelated gens in the C. canephora genome. The results showed that genome of C. canephora consists of 152 protein-coding genes related to auxin which are divided into 7 main groups depending on domain and motif: Auxin-induced protein
  Auxin-binding protein
  Auxin transporter-like protein
  Auxin carrier component
  Auxin response factor
  Auxin-responsive protein
  Auxin signaling protein. Using SMART software to analyze protein structure, the result indicated that there are some characteristic domains involved in auxin response such as EamA
  AUX_IAA
  Auxin inducible
  Aldo_ket_red
  Cupin
  Aa_ trans
  B3, Auxin_resp
  Mem_trans
  B561
  GH3
  and LRR domain. The study on candidate proteincoding genes relating to auxin is important for elucidating protein functions involved in various cellular processes, growth, development and climate change adaptation of C. canephora.
Tạo bộ sưu tập với mã QR

THƯ VIỆN - TRƯỜNG ĐẠI HỌC CÔNG NGHỆ TP.HCM

ĐT: (028) 36225755 | Email: tt.thuvien@hutech.edu.vn

Copyright @2024 THƯ VIỆN HUTECH