Adenomas from individuals with pathogenic biallelic variants in the MUTYH and NTHL1 genes demonstrate base excision repair tumour mutational signature profiles similar to colorectal cancers, expanding potential diagnostic and variant classification applications.

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Tác giả: Lesley Andrews, Krzysztof Bernatowicz, Daniel D Buchanan, Mark Clendenning, Julia Como, Steven Gallinger, Peter Georgeson, Margaret Gleeson, Robert C Grant, Alexandra Groves, Emma Healey, John L Hopper, Mark A Jenkins, Jihoon E Joo, Sharelle Joseland, Finlay A Macrae, Khalid Mahmood, Ana B D Medeiros, Brenely V Murillo, Nicholas Pachter, Bernard J Pope, Nicola Poplawski, Susan G Preston, Christophe Rosty, Allan D Spigelman, Kevin Sweet, Giovana T Torrezan, Romy Walker, Aung K Win, Ingrid M Winship

Ngôn ngữ: eng

Ký hiệu phân loại: 388.41324 *Local transportation

Thông tin xuất bản: United States : Translational oncology , 2025

Mô tả vật lý:

Bộ sưu tập: NCBI

ID: 641518

BACKGROUND: Colorectal cancers (CRCs) from people with biallelic germline likely pathogenic/pathogenic variants in MUTYH or NTHL1 exhibit specific single base substitution (SBS) mutational signatures, namely combined SBS18 and SBS36 (SBS18+SBS36), and SBS30, respectively. The aim was to determine if adenomas from biallelic cases demonstrated these mutational signatures at diagnostic levels. METHODS: Whole-exome sequencing of FFPE tissue and matched blood-derived DNA was performed on 9 adenomas and 15 CRCs from 13 biallelic MUTYH cases, on 7 adenomas and 2 CRCs from 5 biallelic NTHL1 cases and on 27 adenomas and 26 CRCs from 46 non-hereditary (sporadic) participants. All samples were assessed for COSMIC v3.2 SBS mutational signatures. RESULTS: In biallelic MUTYH cases, SBS18+SBS36 signature proportions in adenomas (mean±standard deviation, 65.6 %±29.6 %) were not significantly different to those observed in CRCs (76.2 % ± 20.5 %, p-value=0.37), but were significantly higher compared with non-hereditary adenomas (7.6 % ± 7.0 %, p-value=3.4 × 10 CONCLUSIONS: SBS18+SBS36 and SBS30 were enriched in adenomas at comparable proportions to those observed in CRCs from biallelic MUTYH and biallelic NTHL1 cases, respectively. Therefore, testing adenomas may improve the identification of biallelic cases and facilitate variant classification, ultimately enabling opportunities for CRC prevention.
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