Ribosome profiling reveals dynamic translational landscape following X-ray irradiation.

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Tác giả: Xiangwei Gao, Jingyu Hou, Saisai Wei, Canlan Wu, Lei Yu

Ngôn ngữ: eng

Ký hiệu phân loại: 627.8 Dams and reservoirs

Thông tin xuất bản: United States : Genomics , 2025

Mô tả vật lý:

Bộ sưu tập: NCBI

ID: 709588

X-ray irradiation induces widespread changes in gene expression. Positioned at the bottom of the central dogma, translational regulation responds swiftly to environmental stimuli, fine-tuning protein levels. However, the global view of mRNA translation following X-ray exposure remains unclear. In this study, we systematically investigated X-ray-induced translational alternation using ribosome profiling. Our study revealed a temporary translation inhibition in HEK293T cells following X-ray treatment. A subset of mRNAs experienced translational upregulation by bypassing upstream open reading frames (uORFs). The upregulated genes were enriched in the MAPK signaling pathway, such as MAPKBP1. Suppression of MAPKBP1 inhibited X-ray-induced cell apoptosis. Furthermore, we identified the induction of novel peptides encoded by small open reading frames (smORFs) within long non-coding RNAs (lncRNAs) upon X-ray treatment. Overall, our findings provide a comprehensive overview of the translational landscape within eukaryotic cells following X-ray treatment, offering new insights into DNA damage response.
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