Optical genome mapping enables accurate testing of large repeat expansions.

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Tác giả: Stephanie L Burke, Mark A Corbett, Michael D Gallagher, Jozef Gecz, Alex Hastie, Alexander Hoischen, Eveline Kamping, Erik-Jan Kamsteeg, Ellen Kater-Baats, Joyce Lee, Kornelia Neveling, Michiel Oorsprong, Andy Wing Chun Pang, Maartje Pennings, Ingrid E Scheffer, Syukri Shukor, Alide A Tieleman, Ronald van Beek, Bart van der Sanden, Lisenka E L M Vissers, Nicol C Voermans

Ngôn ngữ: eng

Ký hiệu phân loại:

Thông tin xuất bản: United States : Genome research , 2025

Mô tả vật lý:

Bộ sưu tập: NCBI

ID: 727347

Short tandem repeats (STRs) are common variations in human genomes that frequently expand or contract, causing genetic disorders, mainly when expanded. Traditional diagnostic methods for identifying these expansions, such as repeat-primed PCR and Southern blotting, are often labor-intensive, locus-specific, and are unable to precisely determine long repeat expansions. Sequencing-based methods, although capable of genome-wide detection, are limited by inaccuracy (short-read technologies) and high associated costs (long-read technologies). This study evaluated optical genome mapping (OGM) as an efficient, accurate approach for measuring STR lengths and assessing somatic stability in 85 samples with known pathogenic repeat expansions in
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