Transcriptomic profile of RNA pseudouridine modification as a biomarker for cellular senescence associated with survival outcomes in colorectal cancer.

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Tác giả: Zhenghua Chen, Ji Cui, Yingguo Gan, Junyi Han, Meijin Huang, Mingzhe Huang, Tuoyang Li, Xuan Li, Ziming Li, Jinxin Lin, Kaixin Lin, Haotian Liu, Yanxin Luo, Zixiao Wan, Jingrong Weng, Yuanhui Wu, Huichuan Yu, Ze Yuan

Ngôn ngữ: eng

Ký hiệu phân loại:

Thông tin xuất bản: England : BMC biology , 2025

Mô tả vật lý:

Bộ sưu tập: NCBI

ID: 733414

BACKGROUND: Colorectal cancer (CRC) is considered as an age-related disease, and cellular senescence (CS) plays a crucial role in cancer development and progression. Previous studies have shown the role of epigenetic changes in aging and cancer development, but the role of RNA pseudouridine (Ψ) modification in aging and cancer remains to be explored. RESULTS: Using bulk RNA sequencing, CRC cells with low Ψ writers expression levels have higher CS levels. We developed the Psi Score for assessing the transcriptomic profile of RNA Ψ modification regulation and found that the Psi Score correlates with CS. Furthermore, Psi-related senescence may be mediated by mTOR, TGF-β, TNF-α, and inflammatory response signaling pathways. Meanwhile, Psi Score could predict the anti-cancer treatment outcomes of anti-aging interventions and could be used to predict the response to immunotherapy. CONCLUSIONS: Overall, these findings reveal that RNA Ψ modification connected aging and cancer and provided novel insights into biomarker-guided cancer regimens.
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